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chip dna clean concentrator kit  (Zymo Research)


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    Structured Review

    Zymo Research chip dna clean concentrator kit
    Chip Dna Clean Concentrator Kit, supplied by Zymo Research, used in various techniques. Bioz Stars score: 99/100, based on 1515 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/chip+dna+clean+and+concentrator+kit/ChIP+DNA+Clean+%26+Concentrator/pmc13651863-382-8-14
    Average 99 stars, based on 1515 article reviews
    chip dna clean concentrator kit - by Bioz Stars, 2026-10
    99/100 stars

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    Related Articles

    Purification:

    Article Title: H3K27me3 and H2A.Z prime cold regulated genes, and their remodelling governs plant cold response
    Article Snippet: .. Reverse crosslinked DNA was purified using ChIP DNA clean and concentrator kit (Zymo Research) following the manufacturer’s instructions and eluted in a final volume of 20 μl. .. Library preparation from the eluted DNA and PE100 sequencing on a DNBseq sequencing platform was performed at the Beijing Genomics institute (Hong Kong).

    Article Title: SETDB1 and HUSH modulate Xist RNA levels during establishment of X chromosome inactivation.
    Article Snippet: .. DNA from the IP elutions and input samples was further purified using the ChIP DNA Clean and Concentrator Kit (Zymo Research) according to manufacturer’s instructions. .. ChIP and input DNA was quantified using the Qubit High Sensitivity DNA kit (Invitrogen) and submitted for library preparation using the NEBNext Ultra II DNA Library Prep Kit (New England Biolabs) according to the manufacturer’s instructions.

    Article Title: The Rpd3 histone deacetylase is a critical regulator of temperature-mediated morphogenesis and virulence in the human fungal pathogen Histoplasma
    Article Snippet: IP and Input DNA samples were then treated with 2 μg of RNase A (Qiagen) and incubated at 37 °C for 1 hour. .. DNA was then purified using the Zymo ChIP DNA Clean and Concentrator Kit (D5205) and eluted in 31 μL of ddH 2 O or TE. .. Purified IP and input DNA were used for Illumina library preparation using the NEBNext Ultra II DNA Library Prep Kit (NEB E7103S) and Illumina dual-indexed primer pairs sourced from the UCSF CAT.

    Article Title: Histone acetylation-dependent clustering of BRD2 instructs transcription dynamics.
    Article Snippet: .. The resulting DNA was purified using ChIP DNA Clean and Concentrator kit (Zymo Research) according to the manufacturer’s protocol. .. Purified input and ChIP DNA were used for qPCR (Supplementary Table 2) or to prepare Illumina multiplexed sequencing libraries using NEBNext Ultra II DNA Library Prep Kit.

    Article Title: Histone acetylation-dependent clustering of BRD2 instructs transcription dynamics
    Article Snippet: .. The resulting DNA was purified using ChIP DNA Clean and Concentrator kit (Zymo Research) according to the manufacturer’s protocol. .. Purified input and ChIP DNA were used for qPCR (Supplementary Table ) or to prepare Illumina multiplexed sequencing libraries using NEBNext Ultra II DNA Library Prep Kit.

    Article Title: Ubiquitination of Oncogenic Mutant p53 via Attenuation of Ribosome Biogenesis Machinery Effectively Inhibits Pancreatic Tumor Growth
    Article Snippet: .. The samples were purified using the ChIP DNA clean and concentrator kit (Cat. No. D5205, Zymo Research) and eluted in 20 μL elution buffer. .. An equal amount of DNA (20–25 μg) was suspended in ChIP dilution buffer (final volume of suspension equal to 500 μL).

    Article Title: SETDB1 and HUSH modulate Xist RNA levels during establishment of X chromosome inactivation.
    Article Snippet: .. IP and input samples were reverse crosslinked overnight and RNAse- and Proteinase K-treated, and the DNA was further purified using the ChIP DNA Clean and Concentrator Kit (Zymo Research) according to manufacturer’s instructions. .. ChIP and input DNA was quantified using the Qubit High Sensitivity DNA kit (Invitrogen) and used for library preparation using the the NEBNext Ultra II DNA Library Prep Kit with size selection post-PCR amplification (New England Biolabs) according to the manufacturer’s instructions.

    Chromatin Immunoprecipitation:

    Article Title: H3K27me3 and H2A.Z prime cold regulated genes, and their remodelling governs plant cold response
    Article Snippet: .. Reverse crosslinked DNA was purified using ChIP DNA clean and concentrator kit (Zymo Research) following the manufacturer’s instructions and eluted in a final volume of 20 μl. .. Library preparation from the eluted DNA and PE100 sequencing on a DNBseq sequencing platform was performed at the Beijing Genomics institute (Hong Kong).

    Article Title: SETDB1 and HUSH modulate Xist RNA levels during establishment of X chromosome inactivation.
    Article Snippet: .. DNA from the IP elutions and input samples was further purified using the ChIP DNA Clean and Concentrator Kit (Zymo Research) according to manufacturer’s instructions. .. ChIP and input DNA was quantified using the Qubit High Sensitivity DNA kit (Invitrogen) and submitted for library preparation using the NEBNext Ultra II DNA Library Prep Kit (New England Biolabs) according to the manufacturer’s instructions.

    Article Title: The Rpd3 histone deacetylase is a critical regulator of temperature-mediated morphogenesis and virulence in the human fungal pathogen Histoplasma
    Article Snippet: IP and Input DNA samples were then treated with 2 μg of RNase A (Qiagen) and incubated at 37 °C for 1 hour. .. DNA was then purified using the Zymo ChIP DNA Clean and Concentrator Kit (D5205) and eluted in 31 μL of ddH 2 O or TE. .. Purified IP and input DNA were used for Illumina library preparation using the NEBNext Ultra II DNA Library Prep Kit (NEB E7103S) and Illumina dual-indexed primer pairs sourced from the UCSF CAT.

    Article Title: Histone acetylation-dependent clustering of BRD2 instructs transcription dynamics.
    Article Snippet: .. The resulting DNA was purified using ChIP DNA Clean and Concentrator kit (Zymo Research) according to the manufacturer’s protocol. .. Purified input and ChIP DNA were used for qPCR (Supplementary Table 2) or to prepare Illumina multiplexed sequencing libraries using NEBNext Ultra II DNA Library Prep Kit.

    Article Title: Histone acetylation-dependent clustering of BRD2 instructs transcription dynamics
    Article Snippet: .. The resulting DNA was purified using ChIP DNA Clean and Concentrator kit (Zymo Research) according to the manufacturer’s protocol. .. Purified input and ChIP DNA were used for qPCR (Supplementary Table ) or to prepare Illumina multiplexed sequencing libraries using NEBNext Ultra II DNA Library Prep Kit.

    Article Title: Ubiquitination of Oncogenic Mutant p53 via Attenuation of Ribosome Biogenesis Machinery Effectively Inhibits Pancreatic Tumor Growth
    Article Snippet: .. The samples were purified using the ChIP DNA clean and concentrator kit (Cat. No. D5205, Zymo Research) and eluted in 20 μL elution buffer. .. An equal amount of DNA (20–25 μg) was suspended in ChIP dilution buffer (final volume of suspension equal to 500 μL).

    Article Title: SETDB1 and HUSH modulate Xist RNA levels during establishment of X chromosome inactivation.
    Article Snippet: .. IP and input samples were reverse crosslinked overnight and RNAse- and Proteinase K-treated, and the DNA was further purified using the ChIP DNA Clean and Concentrator Kit (Zymo Research) according to manufacturer’s instructions. .. ChIP and input DNA was quantified using the Qubit High Sensitivity DNA kit (Invitrogen) and used for library preparation using the the NEBNext Ultra II DNA Library Prep Kit with size selection post-PCR amplification (New England Biolabs) according to the manufacturer’s instructions.

    other:

    Article Title: The Rpd3 histone deacetylase is a critical regulator of temperature-mediated morphogenesis and virulence in the human fungal pathogen Histoplasma.
    Article Snippet: Input samples were also used to assess shearing using a High Sensitivity DNA Bioanalyzer chip from Agilent.



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